This function returns summary statistics for PMMH output objects, including means, standard deviations, medians, credible intervals, and diagnostics.
Usage
# S3 method for class 'pmmh_output'
summary(object, ...)Examples
# Create dummy chains for two parameters across two chains
chain1 <- data.frame(param1 = rnorm(100), param2 = rnorm(100), chain = 1)
chain2 <- data.frame(param1 = rnorm(100), param2 = rnorm(100), chain = 2)
dummy_output <- list(
theta_chain = rbind(chain1, chain2),
diagnostics = list(
ess = c(param1 = 200, param2 = 190),
rhat = c(param1 = 1.01, param2 = 1.00)
)
)
class(dummy_output) <- "pmmh_output"
summary(dummy_output)
#> mean sd median 2.5% 97.5% ESS Rhat
#> param1 -0.02083819 0.9966782 -0.04662458 -2.082746 2.287702 200 1.01
#> param2 0.04569322 1.1159165 -0.01283688 -2.012931 2.055034 190 1.00
