This function returns summary statistics for PMMH output objects, including means, standard deviations, medians, credible intervals, and diagnostics.
Usage
# S3 method for class 'pmmh_output'
summary(object, ...)
Examples
# Create dummy chains for two parameters across two chains
chain1 <- data.frame(param1 = rnorm(100), param2 = rnorm(100), chain = 1)
chain2 <- data.frame(param1 = rnorm(100), param2 = rnorm(100), chain = 2)
dummy_output <- list(
theta_chain = rbind(chain1, chain2),
diagnostics = list(
ess = c(param1 = 200, param2 = 190),
rhat = c(param1 = 1.01, param2 = 1.00)
)
)
class(dummy_output) <- "pmmh_output"
summary(dummy_output)
#> mean sd median 2.5% 97.5% ESS Rhat
#> param1 -0.09052223 0.9867457 0.0139562 -2.124148 2.005799 200 1.01
#> param2 -0.12282298 1.0834494 -0.1747597 -2.195476 2.122307 190 1.00